WebNov 1, 2024 · Fit-Hi-C is a tool for assigning statistical confidence estimates to intra-chromosomal contact maps produced by genome-wide genome conformation capture … Webfithic/createFitHiCContacts-hic.sh at master · ay-lab/fithic · GitHub ay-lab / fithic Public Notifications Fork 18 Star 57 master fithic/fithic/utils/createFitHiCContacts-hic.sh Go to file Cannot retrieve contributors at this time executable file 26 lines (21 sloc) 587 Bytes Raw Blame #!/bin/bash HIC_DUMPED=$1 CHR1=$2 CHR2=$3 OUT=$4 RES=$5
fithic/CombineNearbyInteraction.py at master · ay-lab/fithic · GitHub
WebLimited by file size of github, the rawdata of HiC-Pro and hichipper need to be downloaded by user The running methods of HiC-Pro and hichipper are shown in workflow.sh The downloading detail of HiC-Pro rawdata is shown in lib/HiC-Pro/Rawdata/README The downloading detail of hichipper rawdata is shown in lib/hichipper/HiC … WebContribute to aryakaul/FitHiC-R development by creating an account on GitHub. Fit-Hi-C. NOTICE: Fit-Hi-C is deprecated, and is currently without support. movie gregory peck as general macarthur
HiCKRy.py Key errors · Issue #41 · ay-lab/fithic · GitHub
WebFit-Hi-C is a tool for assigning statistical confidence estimates to intra-chromosomal contact maps produced by genome-wide genome architecture assays such as Hi-C. … WebDec 12, 2024 · After running hicpro2fithic.py and found that the output file named fragmentMappability.gz is not exactly in the fithic input required format. Here is the screenshot. This file is fragment file for the fithic and the description for this file is I … WebHi, I am processing a HiC-Pro results from a small genome (in scaffolds) at 5000bp resolution. I have used HiCPro2FitHiC utility to convert data and also generated the KR biases file using HiCKRy.py. movie green card free online